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<title>Department of Biochemistry and Molecular Biology</title>
<link href="http://reposit.library.du.ac.bd:8080/xmlui/xmlui/handle/123456789/41" rel="alternate"/>
<subtitle/>
<id>http://reposit.library.du.ac.bd:8080/xmlui/xmlui/handle/123456789/41</id>
<updated>2026-04-06T22:59:02Z</updated>
<dc:date>2026-04-06T22:59:02Z</dc:date>
<entry>
<title>High Density Lipoprotein in Bangladeshi Adults: Characterization and the Basis of its Variation</title>
<link href="http://reposit.library.du.ac.bd:8080/xmlui/xmlui/handle/123456789/4779" rel="alternate"/>
<author>
<name>Saiedullah, Muhammad</name>
</author>
<id>http://reposit.library.du.ac.bd:8080/xmlui/xmlui/handle/123456789/4779</id>
<updated>2026-03-02T04:46:36Z</updated>
<published>2026-03-02T00:00:00Z</published>
<summary type="text">High Density Lipoprotein in Bangladeshi Adults: Characterization and the Basis of its Variation
Saiedullah, Muhammad
Background and objectives: High-density lipoprotein cholesterol (HDL-c) constitutes a vital&#13;
cardioprotective factor, yet low levels are prevalent among the Bangladeshi population, and its&#13;
biochemical and genetic determinants remain poorly characterized. This study aimed to&#13;
determine the prevalence of low HDL-c and associated components of dyslipidemia, along with&#13;
their demographic and biochemical factors, among healthy Bangladeshi adults. The main focus&#13;
of the study was to determine the effect of twelve single nucleotide polymorphisms (SNPs) in&#13;
genes involved in lipid dynamics, i.e., ApoA1 (–75 G/A and +83 C/T), ApoB (7673C/T [rs693],&#13;
10108A/G [rs1801701], 12669G/A [rs1042031]), ABCA1 (–565C/T, 1051G/A, 2868G/A),&#13;
PON1 (163T/A [rs854560, L55M] and 575A/G [rs662, Q192R]), and CETP (–629C/A, 277C/T&#13;
[Taq1B]) was explored.&#13;
Methodology: This cross-sectional study recruited 409 healthy adults from different areas of the&#13;
Dhaka division. Participants were free from diabetes, hypertension, kidney, liver, or other&#13;
chronic diseases. After obtaining informed consent, demographic measurements and clinical&#13;
histories were recorded. Fasting blood samples (5 mL) were collected following aseptic&#13;
procedures and processed for biochemical analyses using automated spectrophotometric&#13;
instruments. Measurements of serum lipids, specifically total cholesterol (TC), triglycerides&#13;
(TG), and HDL-c, were conducted by spectrophotometric end-point methods. Low-density&#13;
lipoprotein cholesterol (LDL-c) was subsequently derived via the Friedewald formula.&#13;
Additionally, Apolipoprotein A1 (ApoA1) and Apolipoprotein B (ApoB) concentrations in&#13;
serum were quantified using immunoturbidimetry on an automated platform. A column-based&#13;
genomic DNA extraction kit was used to extract DNA from homogenized whole blood&#13;
leukocytes, and genotyped SNPs in the ApoA1, ApoB, ABCA1, PON1, and CETP genes using&#13;
Polymerase Chain Reaction-Restriction Fragment Length Polymorphism (PCR-RFLP) followed&#13;
by agarose-gel electrophoresis. We categorized the participants based on median HDL-c levels&#13;
or according to reference values into lower HDL-c and higher HDL-c groups following NCEPATPIII&#13;
guidelines for statistical analysis. Logistic or multiple linear regressions and Fisher’s&#13;
exact tests were employed to assess associations between genotypes, allele frequencies, lipid&#13;
profiles, and demographic variables.&#13;
Results: The median value of serum HDL-c of the total participants was 34.0 (95%CI: 33.0–&#13;
35.0) mg/dL. Females exhibited significantly higher levels of HDL-c than males [37.1 (35.5–&#13;
xvii&#13;
38.5) mg/dL vs. 31.6 (30.7–32.6) mg/dL, p &lt; 0.001]. Lower levels of HDL-c (&lt; 40 mg/dL for&#13;
males and &lt; 50 mg/dL for females) were prevalent in 91.9% of the participants with similar&#13;
prevalence across genders (90.4% vs 93.7%, p = 0.229). Among the participants, elevated levels&#13;
of triglycerides (&gt;150 mg/dL) were found in 34.0%, total cholesterol (&gt;200 mg/dL) in 21.0%,&#13;
and LDL-c (&gt;130 mg/dL) in 8.8%. In contrast to HDL-c, gender-based differences were&#13;
observed in the prevalence of other lipid abnormalities. Elevated TG levels were significantly&#13;
more common among males (40.2%) than females (26.8%, p = 0.005). Conversely, females&#13;
exhibited a higher prevalence of elevated LDL-c (12.6% vs 5.5%, p = 0.013) and increased&#13;
ApoA1 concentrations (62.6% vs 50.2%, p = 0.012). Their concentrations were also differed&#13;
between genders, males with HDL-c below the median (&lt; 31.6 mg/dL) showed higher TG (156&#13;
vs 114 mg/dL, p &lt; 0.001) and BMI (24.65 vs 23.05 kg/m², p = 0.002) with lower ApoA1 (108 vs&#13;
132 mg/dL, p &lt; 0.001), whereas females with lower levels of serum HDL-c (&lt; 37.1 mg/dL) had&#13;
lower levels of serum TC (159 vs 178 mg/dL, p &lt; 0.001), LDL-c (102 vs 114 mg/dL, p &lt; 0.001),&#13;
and ApoA1 (123 vs 148 mg/dL, p &lt; 0.001) along with higher TG (128 vs 103 mg/dL, p &lt; 0.001).&#13;
Logistic regression statistics identified increased TG and decreased ApoA1 as significant&#13;
predictors of lower HDL-c across both genders.&#13;
Across the gene loci studied, ApoA1 (–75 G/A and +83 C/T), ApoB (7673C/T, 10108A/G,&#13;
12669G/A), ABCA1 (–565C/T, 1051G/A, 2868G/A), PON1 (163T/A and 575A/G), and CETP&#13;
(–629C/A and 277C/T), majority of the subjects exhibited wild-type homozygous genotypes.&#13;
Heterozygous genotypes were less frequent than wild homozygous, and mutant homozygous&#13;
genotypes were rare. The genotype distributions for most loci conformed to Hardy–Weinberg&#13;
equilibrium (HWE). Exceptions were noted for ABCA1 2868G/A (p = 0.034), where the&#13;
distribution deviated from HWE.&#13;
We found no significant differences in HDL-c and ApoA1 or other lipid variables across the&#13;
ApoA1 –75G/A and +83C/T genotypes among the overall subjects or males and females. In&#13;
multivariable linear regression for HDL-c (n = 392), after adjusting for age, BMI, TG and LDL-c&#13;
neither the –75GG (β = 0.806, p = 0.277) nor the +83CC (β = –1.212, p = 0.330) genotype&#13;
showed any significant association with HDL-c in the overall sample. Within the male subgroup&#13;
(n = 210), associations for –75GG (β = –0.665, p = 0.462) and +83CC (β = 1.535, p = 0.325)&#13;
were non-significant. In contrast, in females the –75GG genotype was linked to a 2.78 mg/dL&#13;
xviii&#13;
increase (β = 2.783, p = 0.023) and the +83CC genotype to a 4.28 mg/dL decrease (β = –4.281, p&#13;
= 0.031) in HDL-c. For serum ApoA1, the overall and male subgroup models showed no&#13;
significant associations with either –75GG (overall: β = 0.629, p = 0.796; males: β = –2.401, p =&#13;
0.459, females: β = 4.606, p = 0.220 ) or +83CC (overall: β = –1.151, p = 0.778; males: β =&#13;
4.375, p = 0.434, females: β = –7.796, p = 0.201). Thus, ApoA1 –75 and +83 variants do not&#13;
independently affect serum ApoA1 levels, they modulate HDL-c in a gender-specific manner,&#13;
with significant associations observed only in females.&#13;
Both the ApoB 12669G/A genotype distribution (p = 0.019) and allelic frequencies (p = 0.016)&#13;
differed between normal and elevated LDL-c groups. Additionally, the ApoB 12669 A allele&#13;
frequency was higher in subjects with elevated ApoB levels (p = 0.042). Logistic regression&#13;
revealed the carriers of ApoB 10108 GA+AA had higher risk of elevated TG (OR = 3.36, 95%&#13;
CI: 1.20–9.45, p = 0.021). Conversely, the ApoB 12669 GA+AA genotype was protective for&#13;
elevated LDL-c (OR = 0.33, 95% CI: 0.12–0.87, p = 0.023) and elevated ApoB levels&#13;
(OR = 0.51, 95% CI: 0.27–0.99, p = 0.045). None of the ABCA1 –565C/T, 1051G/A and&#13;
2868G/A SNPs differed in genotype distribution and allele frequency between the two groups of&#13;
HDL-c (P&gt;0.05). The ABCA1 –565TT, 1051AA, and 2868 GA+AA genotypes were not&#13;
associated with low HDL-c. This was evident from the adjusted OR statistics: 0.80 (95% CI:&#13;
0.49 - 1.31, p = 0.186) for –565TT; 1.46 (95% CI: 0.74 - 2.89, p = 0.403) for 1051AA; and 1.12&#13;
(95% CI: 0.49 - 1.63, p = 0.809) for 2868 GA+AA. The median (95%CI) of the PON1&#13;
arylesterase (PON1-ARE) was 2.50 (2.41 – 2.56) kU/L in the total subjects and higher in males&#13;
compared to females 2.56 (2.49 – 2.67) vs 2.41 (2.28 – 2.53, p = 0.028). PON1-ARE was highest&#13;
in 163TT and 575GG genotypes, followed by heterozygous 163TA and 575AG, homozygous&#13;
163AA and 575AA. The 163TT, TA and TT genotypes and T, A alleles were almost similar in&#13;
the two groups of HDL-c (p &gt; 0.05). Similarly, the 575 AA, AG and GG genotypes and A, G&#13;
alleles showed no difference between the two HDL-c groups (p &gt;0.05). Logistic regression&#13;
statistics revealed no association of 163T/A and 575A/G with HDL-c [OR(95%CI): 1.06 (0.68 –&#13;
1.65), p = 0.804; 0.90 (0.59 – 1.38), p = 0.630]. No significant differences in genotype&#13;
distribution or allele frequencies of CETP –629CA and 277CT SNPs were observed between&#13;
HDL-c groups (p &gt; 0.05). For the 277C/T polymorphism, the combined 277(CC+CT) genotypes&#13;
differed significantly from the TT genotype between HDL-c groups (p = 0.011, OR = 0.37, 95%&#13;
xix&#13;
CI = 0.18–0.78). Higher HDL-c was observed in –629AA (p = 0.023) and CA+AA (p = 0.043)&#13;
carriers compared to CC carriers. Similarly, higher HDL-c was observed in 277TT (p = 0.002)&#13;
and CT+TT (p = 0.019) carriers compared to CC genotype. Finally, multiple linear regression&#13;
statistics revealed negative effects of -629CC (β = –1.106, p = 0.038) and 277(CC+CT) (β = –&#13;
0.963, p = 0.016) on serum HDL-c levels.&#13;
Conclusion: Low levels of HDL-c are exceedingly prevalent among the Bangladeshi population&#13;
and are associated with male gender, elevated TG and decreased ApoA1 levels, potentially&#13;
contributing to a higher risk of atherosclerotic cardiovascular disease (ASCVD) in this group.&#13;
The ApoA1 –75GG showed positive and +83CC showed a negative significant impact on HDL-c&#13;
only in females. The ApoB 10108G/A polymorphism was associated with elevated TG, and the&#13;
12669G/A variant was linked to elevated LDL-c and ApoB levels, although ApoB gene&#13;
polymorphisms did not affect serum HDL-c levels. No association was found between&#13;
circulating HDL-c levels and the common ABCA1 genotypes –656CT (heterozygous), 1051GA&#13;
(heterozygous), and 2868GG (wild homozygous). PON1 163T/A and 575A/G polymorphisms&#13;
contributed to circulating PON1 esterase activity but were not associated with serum HDL-c.&#13;
Notably, the CETP –629CC, 277CC, and 277CT genotypes were associated with low levels of&#13;
HDL-c in the Bangladeshi population, suggesting that screening for CETP gene variants may&#13;
serve as a valuable biomarker for diagnosing low HDL-c levels and potentially guiding&#13;
interventions to reduce ASCVD risk in this population.
This thesis is submitted for the degree of Doctor of Philosophy.
</summary>
<dc:date>2026-03-02T00:00:00Z</dc:date>
</entry>
<entry>
<title>Storage effect on the nutritional quality of three Major pulses</title>
<link href="http://reposit.library.du.ac.bd:8080/xmlui/xmlui/handle/123456789/4182" rel="alternate"/>
<author>
<name>.., Md. Shahjahan</name>
</author>
<id>http://reposit.library.du.ac.bd:8080/xmlui/xmlui/handle/123456789/4182</id>
<updated>2025-04-24T06:04:02Z</updated>
<published>2025-04-24T00:00:00Z</published>
<summary type="text">Storage effect on the nutritional quality of three Major pulses
.., Md. Shahjahan
This thesis is submitted for the degree of Doctor of Philosophy.
</summary>
<dc:date>2025-04-24T00:00:00Z</dc:date>
</entry>
<entry>
<title>The enzymic upgradation of jute cutting</title>
<link href="http://reposit.library.du.ac.bd:8080/xmlui/xmlui/handle/123456789/4181" rel="alternate"/>
<author>
<name>Talukder, Md. Serajul Haque</name>
</author>
<id>http://reposit.library.du.ac.bd:8080/xmlui/xmlui/handle/123456789/4181</id>
<updated>2025-04-24T06:02:31Z</updated>
<published>2025-04-24T00:00:00Z</published>
<summary type="text">The enzymic upgradation of jute cutting
Talukder, Md. Serajul Haque
This thesis is submitted for the degree of Doctor of Philosophy.
</summary>
<dc:date>2025-04-24T00:00:00Z</dc:date>
</entry>
<entry>
<title>Studies on the jute retting enzymes from sclerotium species</title>
<link href="http://reposit.library.du.ac.bd:8080/xmlui/xmlui/handle/123456789/4180" rel="alternate"/>
<author>
<name>Miah, A. K. M. Eshaque</name>
</author>
<id>http://reposit.library.du.ac.bd:8080/xmlui/xmlui/handle/123456789/4180</id>
<updated>2025-04-24T06:01:01Z</updated>
<published>2025-04-24T00:00:00Z</published>
<summary type="text">Studies on the jute retting enzymes from sclerotium species
Miah, A. K. M. Eshaque
This thesis is submitted for the degree of Doctor of Philosophy.
</summary>
<dc:date>2025-04-24T00:00:00Z</dc:date>
</entry>
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